With the framework of new economic geography model, we take use of 2003-2012 city data of Chinese Prefecture Level zones to estimate respectively the impacts of logistics industry on manufacturing agglomeration of the overall, the eastern, central and western China, by the method of GMM. The empirical results show that (1) the development of the logistics industry can significantly promote manufacturing agglomeration in the whole China, but the degree is not average and the direction is different in the three zones mentioned above. (2) in eastern China, the main influencing factors on manufact...